Phosphoramidites

2'-Modified Phosphoramidites
(529/529)
2'-Phosphoramidites
(27/27)
3'-Modified Phosphoramidites
(201/201)
5'-Modified Phosphoramidites
(30/30)
Arabino Phosphoramidites
(23/23)
Base Protected Phosphoramidites (418/418) Dye Phosphoramidites
(53/53)
Label Phosphoramidites
(82/82)
Linker Phosphoramidites
(85/85)
Other Phosphoramidites
(97/97)
PMO Phosphoramidates and Derivatives (33/33) PseudoUridine Phosphoramidite
(12/12)
Reverse Phosphoramidites
(25/25)
Spacer Phosphoramidites
(24/24)
Backbone
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DMTr-2'-O-MOEOE-5-Me-rC(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-MOEOE-5-Me-rC(Bz)-3'-CE-Phosphoramidite, employed in oligonucleotide synthesis, features a methoxyethoxy (MOEOE) group at the 2'-O position and a benzoyl (Bz) protecting group on the 5-methylcytosine (5-Me-rC) amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is utilized to introduce modified cytosine residues into nucleic acid sequences, enhancing stability and target specificity for various research applications, including RNA labeling, probing, and therapeutic development.
CAT: BRP-00621
Molecular Formula: C52H64N5O11P
Molecular Weight: 966.08
Purity: ≥95%
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InChIKey: FKWHQFYMJVJQSH-ACHZJAKQSA-N
IUPAC Name: (2R,3R,4R,5R)-5-(4-benzamido-5-methyl-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(2-(2-methoxyethoxy)ethoxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C52H64N5O11P/c1-36(2)57(37(3)4)69(66-29-15-28-53)68-46-45(35-65-52(40-18-13-10-14-19-40,41-20-24-43(61-7)25-21-41)42-22-26-44(62-8)27-23-42)67-50(47(46)64-33-32-63-31-30-60-6)56-34-38(5)48(55-51(56)59)54-49(58)39-16-11-9-12-17-39/h9-14,16-27,34,36-37,45-47,50H,15,29-33,35H2,1-8H3,(H,54,55,58,59)/t45-,46-,47-,50-,69?/m1/s1
Synonyms: 2'-MOEOE 5-Me-rC(Bz) amidite

DMTr-2'-O-MOEOE-rG(iBu)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-MOEOE-rG(iBu)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, contains a methoxyethoxy (MOEOE) group at the 2'-O position and an isobutyryl (iBu) protecting group on the guanine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified guanine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA research, gene silencing, and aptamer development.
CAT: BRP-00622
Molecular Formula: C49H64N7O11P
Molecular Weight: 958.06
Purity: ≥95%
Appearance: White, off-white to faint yellow powder
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InChIKey: OATUMETWWCLSRW-LCVXBTAASA-N
IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-(2-(2-methoxyethoxy)ethoxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C49H64N7O11P/c1-32(2)45(57)53-48-52-44-41(46(58)54-48)51-31-55(44)47-43(63-29-28-62-27-26-59-7)42(67-68(65-25-13-24-50)56(33(3)4)34(5)6)40(66-47)30-64-49(35-14-11-10-12-15-35,36-16-20-38(60-8)21-17-36)37-18-22-39(61-9)23-19-37/h10-12,14-23,31-34,40,42-43,47H,13,25-30H2,1-9H3,(H2,52,53,54,57,58)/t40-,42-,43-,47-,68?/m1/s1
Synonyms: 2'-MOEOE rG(iBu) amidite; N2-iBu-DMT-2'-O-MOEOE-Gr-CE-Phosphoramidite; N2-isobutyryl-5'-O-(4,4'-dimethoxytrityl)-2'-O-(2-(2-Methoxyethoxy)ethyl)-guanosine-3'-cyanoethyl Phosphoramidite

DMTr-2'-O-MOEOE-rA(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-MOEOE-rA(Bz)-3'-CE-Phosphoramidite is utilized in oligonucleotide synthesis, featuring a methoxyethoxy (MOEOE) group at the 2'-O position and a benzoyl (Bz) protecting group on the adenine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified adenine residues into nucleic acid sequences, enhancing stability and target specificity for various molecular biology applications, including RNA labeling, structural studies, and gene regulation research.
CAT: BRP-00623
Molecular Formula: C52H62N7O10P
Molecular Weight: 976.08
Purity: ≥95%
Appearance: Off-white solid
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InChIKey: PKYUXPBRGLVQBQ-MABFDDSHSA-N
Solubility: Soluble in Acetonitrile, DMF
CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OCCOCCOC)N2C=NC3=C(N=CN=C32)NC(=O)C4=CC=CC=C4)COC(C5=CC=CC=C5)(C6=CC=C(C=C6)OC)C7=CC=C(C=C7)OC
IUPAC Name: N-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-[2-(2-methoxyethoxy)ethoxy]oxolan-2-yl]purin-6-yl]benzamide
InChI: InChI=1S/C52H62N7O10P/c1-36(2)59(37(3)4)70(67-28-14-27-53)69-46-44(33-66-52(39-17-12-9-13-18-39,40-19-23-42(62-6)24-20-40)41-21-25-43(63-7)26-22-41)68-51(47(46)65-32-31-64-30-29-61-5)58-35-56-45-48(54-34-55-49(45)58)57-50(60)38-15-10-8-11-16-38/h8-13,15-26,34-37,44,46-47,51H,14,28-33H2,1-7H3,(H,54,55,57,60)/t44-,46-,47-,51-,70?/m1/s1
Synonyms: (2R,3R,4R,5R)-5-(6-Benzamido-9H-purin-9-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(2-(2-methoxyethoxy)ethoxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite; 2'-MOEOE A(Bz) amidite; N6-Bz-DMT-2'-O-MOEOE-Ar-CE-Phosphoramidite; N6-benzoyl-5'-O-(4,4'-dimethoxytrityl)-2'-O-(2-(2-Methoxyethoxy)ethyl)-adenosine-3'-cyanoethyl Phosphoramidite

DMTr-2'-O-Bu-rA(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Bu-rA(Bz)-3'-CE-Phosphoramidite, used in oligonucleotide synthesis, features a butyl (Bu) group at the 2'-O position, and a benzoyl (Bz) protecting group on the adenine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified adenine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, structural studies, and gene regulation research.
CAT: BRP-00624
Molecular Formula: C51H60N7O8P
Molecular Weight: 930.06
Purity: ≥95%
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InChIKey: PGNPDHTYAGNPAM-LTMMGAFGSA-N
CanonicalSMILES: CCCCOC1C(C(OC1N2C=NC3=C(N=CN=C32)NC(=O)C4=CC=CC=C4)COC(C5=CC=CC=C5)(C6=CC=C(C=C6)OC)C7=CC=C(C=C7)OC)OP(N(C(C)C)C(C)C)OCCC#N
IUPAC Name: N-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-3-butoxy-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-2-yl]purin-6-yl]benzamide
InChI: InChI=1S/C51H60N7O8P/c1-8-9-30-62-46-45(66-67(64-31-16-29-52)58(35(2)3)36(4)5)43(65-50(46)57-34-55-44-47(53-33-54-48(44)57)56-49(59)37-17-12-10-13-18-37)32-63-51(38-19-14-11-15-20-38,39-21-25-41(60-6)26-22-39)40-23-27-42(61-7)28-24-40/h10-15,17-28,33-36,43,45-46,50H,8-9,16,30-32H2,1-7H3,(H,53,54,56,59)/t43-,45-,46-,50-,67?/m1/s1
Synonyms: (2R,3R,4R,5R)-5-(6-Benzamido-9H-purin-9-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-butoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

DMTr-2'-O-Et-rA(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Et-rA(Bz)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, contains an ethyl (Et) group at the 2'-O position, and a benzoyl (Bz) protecting group on the adenine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified adenine residues into nucleic acid sequences, enhancing stability and target specificity for various molecular biology applications, including RNA labeling, gene synthesis, and RNA interference studies.
CAT: BRP-00625
Molecular Formula: C49H56N7O8P
Molecular Weight: 902.00
Purity: ≥95%
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InChIKey: BWEYMSXPRQAMFY-FVPMUMJWSA-N
CanonicalSMILES: CCOC1C(C(OC1N2C=NC3=C(N=CN=C32)NC(=O)C4=CC=CC=C4)COC(C5=CC=CC=C5)(C6=CC=C(C=C6)OC)C7=CC=C(C=C7)OC)OP(N(C(C)C)C(C)C)OCCC#N
IUPAC Name: N-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-ethoxyoxolan-2-yl]purin-6-yl]benzamide
InChI: InChI=1S/C49H56N7O8P/c1-8-60-44-43(64-65(62-29-15-28-50)56(33(2)3)34(4)5)41(63-48(44)55-32-53-42-45(51-31-52-46(42)55)54-47(57)35-16-11-9-12-17-35)30-61-49(36-18-13-10-14-19-36,37-20-24-39(58-6)25-21-37)38-22-26-40(59-7)27-23-38/h9-14,16-27,31-34,41,43-44,48H,8,15,29-30H2,1-7H3,(H,51,52,54,57)/t41-,43-,44-,48-,65?/m1/s1
Synonyms: (2R,3R,4R,5R)-5-(6-Benzamido-9H-purin-9-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-ethoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

DMTr-2'-O-Bu-5-Me-rC(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Bu-5-Me-rC(Bz)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, features a butyl (Bu) group at the 2'-O position, and a benzoyl (Bz) protecting group on the 5-methylcytosine (5-Me-rC) amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified cytosine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, probing, and therapeutic development.
CAT: BRP-00626
Molecular Formula: C51H62N5O9P
Molecular Weight: 920.06
Purity: ≥95%
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InChIKey: JRVKTZYKHMIWMA-BZPNBFHRSA-N
IUPAC Name: (2R,3R,4R,5R)-5-(4-benzamido-5-methyl-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-butoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C51H62N5O9P/c1-9-10-31-61-46-45(65-66(63-32-17-30-52)56(35(2)3)36(4)5)44(64-49(46)55-33-37(6)47(54-50(55)58)53-48(57)38-18-13-11-14-19-38)34-62-51(39-20-15-12-16-21-39,40-22-26-42(59-7)27-23-40)41-24-28-43(60-8)29-25-41/h11-16,18-29,33,35-36,44-46,49H,9-10,17,31-32,34H2,1-8H3,(H,53,54,57,58)/t44-,45-,46-,49-,66?/m1/s1

DMTr-2'-O-Et-5-Me-rC(Bz)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Et-5-Me-rC(Bz)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, features an ethyl (Et) group at the 2'-O position, and a benzoyl (Bz) protecting group on the 5-methylcytosine (5-Me-rC) amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified cytosine residues into nucleic acid sequences, enhancing stability and target specificity for various research applications, including RNA labeling, probing, and therapeutic development.
CAT: BRP-00627
Molecular Formula: C49H58N5O9P
Molecular Weight: 892.00
Purity: ≥95%
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InChIKey: NKWGOVVNANYUQH-ADJAFLDTSA-N
IUPAC Name: (2R,3R,4R,5R)-5-(4-benzamido-5-methyl-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-ethoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C49H58N5O9P/c1-9-59-44-43(63-64(61-30-16-29-50)54(33(2)3)34(4)5)42(62-47(44)53-31-35(6)45(52-48(53)56)51-46(55)36-17-12-10-13-18-36)32-60-49(37-19-14-11-15-20-37,38-21-25-40(57-7)26-22-38)39-23-27-41(58-8)28-24-39/h10-15,17-28,31,33-34,42-44,47H,9,16,30,32H2,1-8H3,(H,51,52,55,56)/t42-,43-,44-,47-,64?/m1/s1

DMTr-2'-O-Bu-rG(iBu)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Bu-rG(iBu)-3'-CE-Phosphoramidite is used in oligonucleotide synthesis, featuring a butyl (Bu) group at the 2'-O position, and an isobutyryl (iBu) protecting group on the guanine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified guanine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, probing, and therapeutic development.
CAT: BRP-00628
Molecular Formula: C48H62N7O9P
Molecular Weight: 912.04
Purity: ≥95%
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InChIKey: BOYCEYCODXCBOY-VKFKYRIUSA-N
IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-butoxy-5-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C48H62N7O9P/c1-10-11-27-60-42-41(64-65(62-28-15-26-49)55(32(4)5)33(6)7)39(63-46(42)54-30-50-40-43(54)51-47(53-45(40)57)52-44(56)31(2)3)29-61-48(34-16-13-12-14-17-34,35-18-22-37(58-8)23-19-35)36-20-24-38(59-9)25-21-36/h12-14,16-25,30-33,39,41-42,46H,10-11,15,27-29H2,1-9H3,(H2,51,52,53,56,57)/t39-,41-,42-,46-,65?/m1/s1

DMTr-2'-O-Et-rG(iBu)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-Et-rG(iBu)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, contains an ethyl (Et) group at the 2'-O position, and an isobutyryl (iBu) protecting group on the guanine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified guanine residues into nucleic acid sequences, enhancing stability and target specificity for various molecular biology applications, including RNA labeling, probing, and therapeutic development.
CAT: BRP-00629
Molecular Formula: C46H58N7O9P
Molecular Weight: 883.98
Purity: ≥95%
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InChIKey: VAXVPZPBYJLJJN-NOYBBXANSA-N
IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-ethoxy-5-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C46H58N7O9P/c1-10-58-40-39(62-63(60-26-14-25-47)53(30(4)5)31(6)7)37(61-44(40)52-28-48-38-41(52)49-45(51-43(38)55)50-42(54)29(2)3)27-59-46(32-15-12-11-13-16-32,33-17-21-35(56-8)22-18-33)34-19-23-36(57-9)24-20-34/h11-13,15-24,28-31,37,39-40,44H,10,14,26-27H2,1-9H3,(H2,49,50,51,54,55)/t37-,39-,40-,44-,63?/m1/s1

DMTr-2'-O-(Methyl behenate)-rC(Ac)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-(Methyl behenate)-rC(Ac)-3'-CE-Phosphoramidite, employed in oligonucleotide synthesis, features a methyl behenate group at the 2'-O position, and an acetyl (Ac) protecting group on the cytosine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is used to introduce modified cytosine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, structural studies, and gene regulation research.
CAT: BRP-00630
Molecular Formula: C64H94N5O11P
Molecular Weight: 1140.45
Purity: ≥95%
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InChIKey: PKSNKLQRIFOCKB-QLODOALFSA-N
IUPAC Name: methyl 22-(((2R,3R,4R,5R)-2-(4-acetamido-2-oxopyrimidin-1(2H)-yl)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)tetrahydrofuran-3-yl)oxy)docosanoate
InChI: InChI=1S/C64H94N5O11P/c1-49(2)69(50(3)4)81(78-47-31-44-65)80-60-57(48-77-64(52-32-27-26-28-33-52,53-35-39-55(73-6)40-36-53)54-37-41-56(74-7)42-38-54)79-62(68-45-43-58(66-51(5)70)67-63(68)72)61(60)76-46-30-25-23-21-19-17-15-13-11-9-10-12-14-16-18-20-22-24-29-34-59(71)75-8/h26-28,32-33,35-43,45,49-50,57,60-62H,9-25,29-31,34,46-48H2,1-8H3,(H,66,67,70,72)/t57-,60-,61-,62-,81?/m1/s1

DMTr-2'-O-C22-rU-3'-CE-Phosphoramidite

Description: DMTr-2'-O-C22-rU-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, contains a C22 group at the 2'-O position, and a uracil (rU) nucleoside. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified uracil residues with extended carbon chains into nucleic acid sequences, enhancing stability and target specificity for various molecular biology applications, including RNA structural studies, aptamer development, and gene regulation research.
CAT: BRP-00631
CAS: 2923115-86-8
Molecular Formula: C61H91N4O9P
Molecular Weight: 1055.39
Purity: ≥95%
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InChIKey: UVVBAOHROLTNIE-PGNDMMQRSA-N
CanonicalSMILES: CCCCCCCCCCCCCCCCCCCCCCOC1C(C(OC1N2C=CC(=O)NC2=O)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC)OP(N(C(C)C)C(C)C)OCCC#N
IUPAC Name: 3-[[(2R,3R,4R,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-5-(2,4-dioxopyrimidin-1-yl)-4-docosoxyoxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile
InChI: InChI=1S/C61H91N4O9P/c1-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-24-25-26-30-45-70-58-57(74-75(72-46-31-43-62)65(48(2)3)49(4)5)55(73-59(58)64-44-42-56(66)63-60(64)67)47-71-61(50-32-28-27-29-33-50,51-34-38-53(68-6)39-35-51)52-36-40-54(69-7)41-37-52/h27-29,32-42,44,48-49,55,57-59H,8-26,30-31,45-47H2,1-7H3,(H,63,66,67)/t55-,57-,58-,59-,75?/m1/s1
Synonyms: (2R,3R,4R,5R)-2-((Bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-(docosyloxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

DMTr-2'-O-C6-rU-3'-CE-Phosphoramidite

Description: DMTr-2'-O-C6-rU-3'-CE-Phosphoramidite is used in oligonucleotide synthesis and features a C6 group at the 2'-O position, and a uracil (rU) nucleoside. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified uracil residues with short carbon chains into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, gene silencing, and aptamer development.
CAT: BRP-00632
CAS: 2382942-78-9
Molecular Formula: C45H59N4O9P
Molecular Weight: 830.96
Purity: ≥95%
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InChIKey: WMIJYXRHECYAIW-ACVVKSTRSA-N
CanonicalSMILES: N#CCCOP(OC1C(OC(N2C=CC(=O)NC2=O)C1OCCCCCC)COC(C=3C=CC=CC3)(C4=CC=C(OC)C=C4)C5=CC=C(OC)C=C5)N(C(C)C)C(C)C
IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-(hexyloxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C45H59N4O9P/c1-8-9-10-14-29-54-42-41(58-59(56-30-15-27-46)49(32(2)3)33(4)5)39(57-43(42)48-28-26-40(50)47-44(48)51)31-55-45(34-16-12-11-13-17-34,35-18-22-37(52-6)23-19-35)36-20-24-38(53-7)25-21-36/h11-13,16-26,28,32-33,39,41-43H,8-10,14-15,29-31H2,1-7H3,(H,47,50,51)/t39-,41-,42-,43-,59?/m1/s1
Synonyms: 2'-O-hexyl U amidite; Uridine, 5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-O-hexyl-, 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]

DMT-Hexylamine-linker Phosphoramidite

Description: DMT-Hexylamine-linker Phosphoramidite is utilized in oligonucleotide synthesis and contains a 4,4'-dimethoxytrityl (DMT) protecting group attached to a hexylamine linker via a phosphoramidite moiety. The hexylamine linker allows for the conjugation of oligonucleotides to various molecules, surfaces, or probes, facilitating applications such as nucleic acid labeling, immobilization, or conjugation to solid supports for affinity purification or detection purposes.
CAT: BRP-00633
CAS: 116919-15-4
Molecular Formula: C36H50N3O4P
Molecular Weight: 619.77
Purity: ≥95%
Appearance: Clear colorless to light yellow oily matter
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InChIKey: PFQIFKFFVAWUPT-UHFFFAOYSA-N
CanonicalSMILES: N#CCCOP(OCCCCCCNC(C=1C=CC=CC1)(C2=CC=C(OC)C=C2)C3=CC=C(OC)C=C3)N(C(C)C)C(C)C
IUPAC Name: 6-((bis(4-methoxyphenyl)(phenyl)methyl)amino)hexyl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C36H50N3O4P/c1-29(2)39(30(3)4)44(43-28-14-25-37)42-27-13-8-7-12-26-38-36(31-15-10-9-11-16-31,32-17-21-34(40-5)22-18-32)33-19-23-35(41-6)24-20-33/h9-11,15-24,29-30,38H,7-8,12-14,26-28H2,1-6H3
Synonyms: Phosphoramidous acid, N,N-bis(1-methylethyl)-, 6-[[bis(4-methoxyphenyl)phenylmethyl]amino]hexyl 2-cyanoethyl ester; Phosphoramidous acid, bis(1-methylethyl)-, 6-[[bis(4-methoxyphenyl)phenylmethyl]amino]hexyl 2-cyanoethyl ester; 6-[[Bis(4-methoxyphenyl)phenylmethyl]amino]hexyl 2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite; 4,4'-Dimethoxytrityl-Hexylamine-Linker Cyanoethyl Phosphoramidite

DMTr-2'-O-(Methyl behenate)-rG(iBu)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-(Methyl behenate)-rG(iBu)-3'-CE-Phosphoramidite, employed in oligonucleotide synthesis, features a methyl behenate group at the 2'-O position, and an isobutyryl (iBu) protecting group on the guanine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is used to introduce modified guanine residues into nucleic acid sequences, enhancing stability and target specificity for applications such as RNA labeling, structural studies, and gene regulation research.
CAT: BRP-00634
Molecular Formula: C67H98N7O11P
Molecular Weight: 1208.53
Purity: ≥95%
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InChIKey: VBNXQNNKVGWZHD-OMTARPPBSA-N
IUPAC Name: methyl 22-(((2R,3R,4R,5R)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)-2-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)tetrahydrofuran-3-yl)oxy)docosanoate
InChI: InChI=1S/C67H98N7O11P/c1-49(2)63(76)71-66-70-62-59(64(77)72-66)69-48-73(62)65-61(81-45-31-26-24-22-20-18-16-14-12-10-11-13-15-17-19-21-23-25-30-35-58(75)80-9)60(85-86(83-46-32-44-68)74(50(3)4)51(5)6)57(84-65)47-82-67(52-33-28-27-29-34-52,53-36-40-55(78-7)41-37-53)54-38-42-56(79-8)43-39-54/h27-29,33-34,36-43,48-51,57,60-61,65H,10-26,30-32,35,45-47H2,1-9H3,(H2,70,71,72,76,77)/t57-,60-,61-,65-,86?/m1/s1

DMTr-2'-O-C22-rG(iBu)-3'-CE-Phosphoramidite

Description: DMTr-2'-O-C22-rG(iBu)-3'-CE-Phosphoramidite, utilized in oligonucleotide synthesis, contains a C22 group at the 2'-O position, and an isobutyryl (iBu) protecting group on the guanine amino group. The 3'-end is functionalized with a cyanoethyl (CE) group, facilitating efficient coupling reactions during solid-phase synthesis. It is employed to introduce modified guanine residues with extended carbon chains into nucleic acid sequences, enhancing stability and target specificity for various molecular biology applications, including RNA labeling, structural studies, and gene regulation research.
CAT: BRP-00635
CAS: 2923115-75-5
Molecular Formula: C66H98N7O9P
Molecular Weight: 1164.52
Purity: ≥95%
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InChIKey: MCJITTOIRVFXAC-JQGRTZKQSA-N
CanonicalSMILES: N#CCCOP(OC1C(OC(N2C=NC=3C(=O)N=C(NC(=O)C(C)C)NC32)C1OCCCCCCCCCCCCCCCCCCCCCC)COC(C=4C=CC=CC4)(C5=CC=C(OC)C=C5)C6=CC=C(OC)C=C6)N(C(C)C)C(C)C
IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(docosyloxy)-5-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C66H98N7O9P/c1-10-11-12-13-14-15-16-17-18-19-20-21-22-23-24-25-26-27-28-32-45-78-60-59(82-83(80-46-33-44-67)73(50(4)5)51(6)7)57(81-64(60)72-48-68-58-61(72)69-65(71-63(58)75)70-62(74)49(2)3)47-79-66(52-34-30-29-31-35-52,53-36-40-55(76-8)41-37-53)54-38-42-56(77-9)43-39-54/h29-31,34-43,48-51,57,59-60,64H,10-28,32-33,45-47H2,1-9H3,(H2,69,70,71,74,75)/t57-,59-,60-,64-,83?/m1/s1

5'-O-DMT-3'-TBDMS-N4-Acetyl-cytidine 2'-CE phosphoramidite (BRP-00727)

Description: 5'-O-DMT-3'-TBDMS-N4-Acetyl-cytidine 2'-CE phosphoramidite, a revolutionary advancement in biomedicine, defies conventional limitations. Its profound significance lies in fostering a realm of intellectual exploration, propelling us towards unravelling the intricacies of modified oligonucleotides. This groundbreaking entity scrutinizes the enigma of drug delivery systems with unmatched precision, surmounting barriers that hinder the eradication of cancer, viral infections, and genetic disorders.
CAT: BRP-00727
Molecular Formula: C47H64N5O9PSi
Molecular Weight: 902.11
Purity: ≥97% by HPLC
Appearance: White to Off-white powder
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InChIKey: GNSFLPDFFNGTCR-YOEDQOPESA-N
Solubility: Soluble in Acetonitrile, DMF
IUPAC Name: (2R,3R,4R,5R)-2-(4-acetamido-2-oxopyrimidin-1(2H)-yl)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C47H64N5O9PSi/c1-32(2)52(33(3)4)62(58-30-16-28-48)60-43-42(61-63(11,12)46(6,7)8)40(59-44(43)51-29-27-41(49-34(5)53)50-45(51)54)31-57-47(35-17-14-13-15-18-35,36-19-23-38(55-9)24-20-36)37-21-25-39(56-10)26-22-37/h13-15,17-27,29,32-33,40,42-44H,16,30-31H2,1-12H3,(H,49,50,53,54)/t40-,42-,43-,44-,62?/m1/s1
Synonyms: 3'-TBDMS-Ac-rC Phosphoramidite; DMT-3'-O-TBDMS-C(Ac)-CE-Phosphoramidite; 3'-TBDMS-rC(Ac) phosphoramidite; 3'-OTBS C(Ac) 2'-amidite; 5'-O-DMT-N4-Acetyl-3'-O-tert-butyldimethylsilyl-cytidine 2'-CE phosphoramidite; Cytidine, N-acetyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-3'-O-[(1,1-dimethylethyl)dimethylsilyl]-, 2'-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]; 3'-TBDMS-rC(Ac) phosphoramidite

TFA-6-amino-hexanol-DMT-2-methyl linker

Description: TFA-6-amino-hexanol-DMT-2-methyl linker is a specialized phosphoramidite compound used in oligonucleotide synthesis. It consists of a phosphoramidite moiety, which serves as a linker to attach nucleotide units during synthesis. Additionally, it contains a 2-methyl group and a 6-amino-hexanol-DMT protective group, along with a trifluoroacetyl (TFA) moiety. These modifications ensure stability during synthesis and enable precise control over the addition of nucleotide units, facilitating the creation of custom oligonucleotides for various molecular biology and biotechnology applications.
CAT: BRP-00728
Molecular Formula: C39H51F3N3O6P
Molecular Weight: 745.82
Purity: ≥97%
Appearance: Colorless oily liquid
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InChIKey: HRDZFZSXSXGZQJ-UHFFFAOYSA-N
CanonicalSMILES: CC(N(C(C)C)P(OCCC#N)OCC(CCCCNC(C(F)(F)F)=O)COC(C1=CC=C(OC)C=C1)(C2=CC=C(OC)C=C2)C3=CC=CC=C3)C
IUPAC Name: 2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-6-(2,2,2-trifluoroacetamido)hexyl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C39H51F3N3O6P/c1-29(2)45(30(3)4)52(50-26-12-24-43)51-28-31(13-10-11-25-44-37(46)39(40,41)42)27-49-38(32-14-8-7-9-15-32,33-16-20-35(47-5)21-17-33)34-18-22-36(48-6)23-19-34/h7-9,14-23,29-31H,10-13,25-28H2,1-6H3,(H,44,46)
Synonyms: TFA-6-amino-hexanol-DMT-2-methyl Phosphoramidite; TFA-6-amino-hexanol-DMT-2-methyl (2-cyanoethyl)-(N,N-diisopropyl)-Phosphoramidite; TFA-6-amino-hexanol-DMT-2-methyl

5-Me-DMT-2'-O-TBDMS-C(Ac)-CE-Phosphoramidite

Description: 5-Me-DMT-2'-O-TBDMS-C(Ac)-CE-Phosphoramidite is a modified nucleotide used in oligonucleotide synthesis. It features a Me group for the 5-position, a TBDMS group at the 2'-position of the ribose, and an acetyl (Ac) group on the cytosine base. The cyanoethyl (CE) group aids in coupling reactions during synthesis. This phosphoramidite facilitates precise modification of oligonucleotide sequences for various molecular biology applications.
CAT: BRP-00730
Molecular Formula: C48H66N5O9PSi
Molecular Weight: 916.14
Purity: ≥98%
Appearance: White to Off-white powder
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InChIKey: RZBVVWCKSUSNLP-KDDRLGGRSA-N
IUPAC Name: (2R,3R,4R,5R)-5-(4-acetamido-5-methyl-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
InChI: InChI=1S/C48H66N5O9PSi/c1-32(2)53(33(3)4)63(59-29-17-28-49)61-42-41(60-45(43(42)62-64(12,13)47(7,8)9)52-30-34(5)44(50-35(6)54)51-46(52)55)31-58-48(36-18-15-14-16-19-36,37-20-24-39(56-10)25-21-37)38-22-26-40(57-11)27-23-38/h14-16,18-27,30,32-33,41-43,45H,17,29,31H2,1-13H3,(H,50,51,54,55)/t41-,42-,43-,45-,63?/m1/s1
Synonyms: N4-Acetyl-5-methyl-5'-O-(4,4'-dimethoxytrityl)-2'-O-TBDMS-cytidine-3'-cyanoethyl phosphoramidite; 2'-OTBDMS-5-Me-C-CE Phosphoramidite; 5'-Dimethoxytrityl-N-acetyl-5-methyl-Cytidine, 2'-O-[(1,1-dimethylethyl)dimethylsilyl], 3'-[(2-cyanoethyl)-(N,N-diisopropyl)]-phosphoramidite; Cytidine, N-acetyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-O-[(1,1-dimethylethyl)dimethylsilyl]-5-methyl-, 3'-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]; 5'-O-DMTr-2'-O-TBDMS-5-Me-C(Ac)-3'-CE-Phosphoramidite; N4-Acetyl-5'-O-(4,4'-dimethoxytrityl)-2'-O-(t-butyl-dimethylsilyl)-5-methyl-cytidine-3'-cyanoethyl Phosphoramidite

1-Fmoc-12-amino-hexane-DMT-2-methyl phosphoramidite

Description: 1-Fmoc-12-amino-hexane-DMT-2-methyl phosphoramidite is a modified phosphoramidite used in solid-phase peptide synthesis (SPPS). It contains an Fmoc-protected amino acid with a 12-amino-hexane linker attached to it, along with a 2-methyl group on the phosphoramidite moiety. This compound facilitates the stepwise assembly of peptides on a solid support in peptide synthesis.
CAT: BRP-00731
Molecular Formula: C63H83N4O12P
Molecular Weight: 1119.35
Purity: ≥95%
Appearance: Colorless oily liquid
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InChIKey: YEIRUDIFMAGFEP-UHFFFAOYSA-N
CanonicalSMILES: CC(N(C(C)C)P(OCC(COC(C1=CC=C(OC)C=C1)(C2=CC=C(OC)C=C2)C3=CC=CC=C3)CCCCNC(CCOCCOCCOCCOCCNC(OCC4C5=C(C=CC=C5)C6=C4C=CC=C6)=O)=O)OCCC#N)C
IUPAC Name: (9H-fluoren-9-yl)methyl (4-((((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)methyl)-1,1-bis(4-methoxyphenyl)-10-oxo-1-phenyl-2,13,16,19,22-pentaoxa-9-azatetracosan-24-yl)carbamate
InChI: InChI=1S/C63H83N4O12P/c1-48(2)67(49(3)4)80(78-36-16-33-64)79-46-50(45-77-63(51-18-8-7-9-19-51,52-24-28-54(70-5)29-25-52)53-26-30-55(71-6)31-27-53)17-14-15-34-65-61(68)32-37-72-39-41-74-43-44-75-42-40-73-38-35-66-62(69)76-47-60-58-22-12-10-20-56(58)57-21-11-13-23-59(57)60/h7-13,18-31,48-50,60H,14-17,32,34-47H2,1-6H3,(H,65,68)(H,66,69)
Synonyms: 1-Fmoc-12-amino-hexane-DMT-2-methyl amidite

Fmoc-6-amino-hexanol-DMT-2-methyl linker

Description: Fmoc-6-amino-hexanol-DMT-2-methyl linker is a component utilized in solid-phase peptide synthesis (SPPS). It consists of an Fmoc-protected amino alcohol with a 6-amino-hexanol linker, along with a 2-methyl group on the phosphoramidite moiety. This linker is employed in peptide synthesis for introducing amino acids onto a solid support.
CAT: BRP-00732
CAS: 147190-40-7
Molecular Formula: C52H62N3O7P
Molecular Weight: 872.06
Purity: ≥97%
Appearance: Colorless oily liquid
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InChIKey: GLNANYHDNPKVLL-UHFFFAOYSA-N
CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCC(CCCCNC(=O)OCC1C2=CC=CC=C2C3=CC=CC=C13)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC
IUPAC Name: 9H-fluoren-9-ylmethyl N-[5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-6-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyhexyl]carbamate
InChI: InChI=1S/C52H62N3O7P/c1-38(2)55(39(3)4)63(61-34-16-32-53)62-36-40(17-14-15-33-54-51(56)59-37-50-48-22-12-10-20-46(48)47-21-11-13-23-49(47)50)35-60-52(41-18-8-7-9-19-41,42-24-28-44(57-5)29-25-42)43-26-30-45(58-6)31-27-43/h7-13,18-31,38-40,50H,14-17,33-37H2,1-6H3,(H,54,56)
Synonyms: Fmoc-6-amino-hexanol-DMT-2-methyl Phosphoramidite; Fmoc-6-amino-hexanol-DMT-2-methyl-(2-cyanoethyl)-(N,N-diisopropyl)-Phosphoramidite; 9,11-Dioxa-2-aza-10-phosphatridecanoic acid, 7-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-[bis(1-methylethyl)amino]-13-cyano-, 9H-fluoren-9-ylmethyl ester; N-Fmoc-C6-2-(DMTmethoxyl)-aminelinker Phosphoramidite; (9H-fluoren-9-yl)methyl (6-(bis(4-methoxyphenyl)(phenyl)methoxy)-5-((((2-cyanoethoxy)(diisopropylamino)phosphanyl)oxy)methyl)hexyl)carbamate
* Only for research. Not suitable for any diagnostic or therapeutic use.
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