Phosphoramidites

Storage: Store at -20 °C

InChIKey: FFFMJLRLMAOUHM-NWPXMRGSSA-N

Solubility: Soluble in Acetonitrile, DMF

IUPAC Name: (2R,3R,4R,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)-5-(4-(((dimethylamino)methylene)amino)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C49H67N8O7PSi/c1-34(2)57(35(3)4)65(61-29-17-28-50)63-43-42(31-60-49(36-18-15-14-16-19-36,37-20-24-39(58-10)25-21-37)38-22-26-40(59-11)27-23-38)62-47(44(43)64-66(12,13)48(5,6)7)56-46-41(30-54-56)45(51-32-52-46)53-33-55(8)9/h14-16,18-27,30,32-35,42-44,47H,17,29,31H2,1-13H3/t42-,43-,44-,47-,65?/m1/s1

Synonyms: 5'-O-DMT-2'-O-TBDMS 7De8a-A(dmf) 3'-CE Phosphoramidite

Storage: Store at -20 °C

InChIKey: UDTLXDXACDJZQQ-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(N(C(C)C)P(OCCC#N)OCCOCCOCCON(C(C1=C2C=CC=C1)=O)C2=O)C

IUPAC Name: 2-cyanoethyl (2-(2-(2-((1,3-dioxoisoindolin-2-yl)oxy)ethoxy)ethoxy)ethyl) diisopropylphosphoramidite

InChI: InChI=1S/C23H34N3O7P/c1-18(2)26(19(3)4)34(32-11-7-10-24)33-17-15-30-13-12-29-14-16-31-25-22(27)20-8-5-6-9-21(20)23(25)28/h5-6,8-9,18-19H,7,11-17H2,1-4H3

Synonyms: Phosphoramidous acid, N,N-bis(1-methylethyl)-, 2-cyanoethyl 2-[2-[2-[(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)oxy]ethoxy]ethoxy]ethyl ester

Storage: Store at -20 °C

InChIKey: GRCXVBYRTJTFCI-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCCOCCOCCOCCON1C(=O)C2=CC=CC=C2C1=O

IUPAC Name: 3-[2-[2-[2-[2-(1,3-dioxoisoindol-2-yl)oxyethoxy]ethoxy]ethoxy]ethoxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile

InChI: InChI=1S/C25H38N3O8P/c1-20(2)28(21(3)4)37(35-11-7-10-26)36-19-17-33-15-13-31-12-14-32-16-18-34-27-24(29)22-8-5-6-9-23(22)25(27)30/h5-6,8-9,20-21H,7,11-19H2,1-4H3

Synonyms: Phosphoramidous acid, N,N-bis(1-methylethyl)-, 2-cyanoethyl 2-[2-[2-[2-[(1,3-dihydro-1,3-dioxo-2H-isoindol-2-yl)oxy]ethoxy]ethoxy]ethoxy]ethyl ester; 2-cyanoethyl (2-(2-(2-(2-((1,3-dioxoisoindolin-2-yl)oxy)ethoxy)ethoxy)ethoxy)ethyl) diisopropylphosphoramidite

Storage: Store at -20 °C

InChIKey: OXPJJHKDHVDTKR-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCCCCCNC(=O)OCCC#N)OCCC#N

IUPAC Name: 2-cyanoethyl N-[6-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyhexyl]carbamate

InChI: InChI=1S/C19H35N4O4P/c1-17(2)23(18(3)4)28(27-16-10-12-21)26-15-8-6-5-7-13-22-19(24)25-14-9-11-20/h17-18H,5-10,13-16H2,1-4H3,(H,22,24)

Synonyms: 2-cyanoethyl (6-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)hexyl)carbamate

Storage: Store at -20 °C

InChIKey: BFXBTPRPHVBFNA-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCCNC(=O)OCC1=CC=CC=C1

IUPAC Name: benzyl N-[2-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyethyl]carbamate

InChI: InChI=1S/C19H30N3O4P/c1-16(2)22(17(3)4)27(25-13-8-11-20)26-14-12-21-19(23)24-15-18-9-6-5-7-10-18/h5-7,9-10,16-17H,8,12-15H2,1-4H3,(H,21,23)

Synonyms: 5-Oxa-2,7-diaza-6-phosphanonanoic acid, 6-(2-cyanoethoxy)-8-methyl-7-(1-methylethyl)-, phenylmethyl ester; benzyl (2-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)ethyl)carbamate

Storage: Store at -20 °C

InChIKey: DEWXQEGATRHNSP-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCCCCCNC(=O)OCC1=CC=CC=C1)OCCC#N

IUPAC Name: benzyl N-[6-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyhexyl]carbamate

InChI: InChI=1S/C23H38N3O4P/c1-20(2)26(21(3)4)31(30-18-12-15-24)29-17-11-6-5-10-16-25-23(27)28-19-22-13-8-7-9-14-22/h7-9,13-14,20-21H,5-6,10-12,16-19H2,1-4H3,(H,25,27)

Synonyms: 9-Oxa-2,11-diaza-10-phosphatridecanoic acid, 10-(2-cyanoethoxy)-12-methyl-11-(1-methylethyl)-, phenylmethyl ester; benzyl (6-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)hexyl)carbamate

Storage: Store at -20 °C

InChIKey: LHDZYEHTVUMWHK-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCCCCCNC(=O)CCl)OCCC#N

IUPAC Name: 2-chloro-N-[6-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyhexyl]acetamide

InChI: InChI=1S/C17H33ClN3O3P/c1-15(2)21(16(3)4)25(24-13-9-10-19)23-12-8-6-5-7-11-20-17(22)14-18/h15-16H,5-9,11-14H2,1-4H3,(H,20,22)

Synonyms: 6-[(2-Chloroacetyl)amino]hexyl 2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite; 6-(2-chloroacetamido)hexyl (2-cyanoethyl) diisopropylphosphoramidite

Storage: Store at -20 °C

InChIKey: VWAHQMAILUKYAF-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(N(C(C)C)P(OCCC#N)OC(COC(C1=CC=CC=C1)(C2=CC=C(OC)C=C2)C3=CC=C(OC)C=C3)COCCOCCOCCNC(OCC4C5=C(C=CC=C5)C6=C4C=CC=C6)=O)C

IUPAC Name: (9H-fluoren-9-yl)methyl (4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)-1,1-bis(4-methoxyphenyl)-1-phenyl-2,6,9,12-tetraoxatetradecan-14-yl)carbamate

InChI: InChI=1S/C54H66N3O10P/c1-40(2)57(41(3)4)68(66-31-14-29-55)67-47(38-65-54(42-15-8-7-9-16-42,43-21-25-45(59-5)26-22-43)44-23-27-46(60-6)28-24-44)37-63-36-35-62-34-33-61-32-30-56-53(58)64-39-52-50-19-12-10-17-48(50)49-18-11-13-20-51(49)52/h7-13,15-28,40-41,47,52H,14,30-39H2,1-6H3,(H,56,58)

Storage: Store at -20 °C

InChIKey: JCLYEEIHQSPYLZ-ZDPTUIABSA-N

Solubility: Soluble in Acetonitrile, DMF

IUPAC Name: (2R,3S,4R,5R)-2-(4-acetamido-2-oxopyrimidin-1(2H)-yl)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)tetrahydrofuran-3-yl acetate

InChI: InChI=1S/C43H52N5O10P/c1-28(2)48(29(3)4)59(55-26-12-24-44)58-39-37(57-41(40(39)56-31(6)50)47-25-23-38(45-30(5)49)46-42(47)51)27-54-43(32-13-10-9-11-14-32,33-15-19-35(52-7)20-16-33)34-17-21-36(53-8)22-18-34/h9-11,13-23,25,28-29,37,39-41H,12,26-27H2,1-8H3,(H,45,46,49,51)/t37-,39-,40+,41-,59?/m1/s1

Synonyms: N-[1-[2-O-Acetyl-5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-β-D-arabinofuranosyl]-1,2-dihydro-2-oxo-4-pyrimidinyl]acetamide; 2'-OAc-C(Ac)-ANA-CE-Phosphoramidite; DMTr-2'-ara-OAc-C(Ac)-3'-CE-Phosphoramidite

Storage: Store at -20 °C

InChIKey: JFFSFQRVIPPCBC-XBCOPKIOSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OC)N2C=CC(=NC2=O)NC(=O)C3=CC=CC=C3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC

IUPAC Name: N-[1-[(2R,3S,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-methoxyoxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide

InChI: InChI=1S/C47H54N5O9P/c1-32(2)52(33(3)4)62(59-30-14-28-48)61-42-40(60-45(43(42)57-7)51-29-27-41(50-46(51)54)49-44(53)34-15-10-8-11-16-34)31-58-47(35-17-12-9-13-18-35,36-19-23-38(55-5)24-20-36)37-21-25-39(56-6)26-22-37/h8-13,15-27,29,32-33,40,42-43,45H,14,30-31H2,1-7H3,(H,49,50,53,54)/t40-,42-,43+,45-,62?/m1/s1

Synonyms: (2R,3R,4S,5R)-5-(4-benzamido-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-methoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite; N-[1-[2-O-Methyl-5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-β-D-arabinofuranosyl]-1,2-dihydro-2-oxo-4-pyrimidinyl]benzamide; 2'-OMe-C(Bz)-ANA-CE-Phosphoramidite; DMTr-2'-ara-OMe-C(Bz)-3'-CE-Phosphoramidite; 5'-O-DMTr-2'-ara-OMe-C(Bz)-3'-CE-Phosphoramidite; N4-benzoyl-(5'-O-(4,4'-dimethoxytrityl)-2'-O-methyl-arabinocytidine-3'-[(2-cyanoethyl)-(N,N-diisopropropyl)]-Phosphoramidite

Storage: Store at -20 °C

InChIKey: IRRDHRZUOZNWDJ-HHNCBLOXSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: N#CCCOP(OC1C(OC(N2C=NC=3C(=O)N=C(NC(=O)C(C)C)NC32)C1OC)COC(C=4C=CC=CC4)(C5=CC=C(OC)C=C5)C6=CC=C(OC)C=C6)N(C(C)C)C(C)C

IUPAC Name: (2R,3R,4S,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2-isobutyramido-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-methoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C45H56N7O9P/c1-28(2)41(53)49-44-48-40-37(42(54)50-44)47-27-51(40)43-39(57-9)38(61-62(59-25-13-24-46)52(29(3)4)30(5)6)36(60-43)26-58-45(31-14-11-10-12-15-31,32-16-20-34(55-7)21-17-32)33-18-22-35(56-8)23-19-33/h10-12,14-23,27-30,36,38-39,43H,13,25-26H2,1-9H3,(H2,48,49,50,53,54)/t36-,38-,39+,43-,62?/m1/s1

Synonyms: DMTr-2'-ara-OMe-G(iBu)-3'-CE-Phosphoramidite; 2'-OMe-G(iBu)-ANA-CE-Phosphoramidite; N-[9-[5-O-[Bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-methyl-β-D-arabinofuranosyl]-6,9-dihydro-6-oxo-1H-purin-2-yl]-2-methylpropanamide; 5'-O-DMTr-2'-ara-OMe-G(iBu)-3'-CE-Phosphoramidite; N2-Isobutyryl-5'-O-(4,4'-dimethoxytrityl)-2'-O-methyl-arabinoguanosine-3'-[(2-cyanoethyl)-(N,N-diisopropropyl)]-Phosphoramidite

Storage: Store at -20 °C

InChIKey: UVUOJOLPNDCIHL-LYEFJPEKSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OC)N2C=CC(=O)NC2=O)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC

IUPAC Name: 3-[[(2R,3R,4S,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile

InChI: InChI=1S/C40H49N4O9P/c1-27(2)44(28(3)4)54(51-25-11-23-41)53-36-34(52-38(37(36)49-7)43-24-22-35(45)42-39(43)46)26-50-40(29-12-9-8-10-13-29,30-14-18-32(47-5)19-15-30)31-16-20-33(48-6)21-17-31/h8-10,12-22,24,27-28,34,36-38H,11,25-26H2,1-7H3,(H,42,45,46)/t34-,36-,37+,38-,54?/m1/s1

Synonyms: 1-[5-O-[Bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-methyl-β-D-arabinofuranosyl]-2,4(1H,3H)-pyrimidinedione; 2'-OMe-U-ANA-CE-Phosphoramidite; (2R,3R,4S,5R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-methoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite; 5-O-(4,4'-dimethoxytrityl)-3-O-(diisopropylamino-2-cyanoethoxyphosphanyl)-1-deoxy-2-O-methyl-1-uracil-1-yl-beta-D-arabino-pentofuranose; DMTr-2'-ara-OMe-U-3'-CE-Phosphoramidite; 5'-O-DMTr-2'-ara-OMe-U-3'-CE-Phosphoramidite; 5'-O-(4,4'-dimethoxytrityl)-2'-O-methyl-arabinouridine-3'-[(2-cyanoethyl)-(N,N-diisopropropyl)]-Phosphoramidite

Storage: Store at -20 °C

InChIKey: AZCGOTUYEPXHMJ-VOJYYREFSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OC)N2C=NC3=C(N=CN=C32)NC(=O)C4=CC=CC=C4)COC(C5=CC=CC=C5)(C6=CC=C(C=C6)OC)C7=CC=C(C=C7)OC

IUPAC Name: N-[9-[(2R,3S,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-methoxyoxolan-2-yl]purin-6-yl]benzamide

InChI: InChI=1S/C48H54N7O8P/c1-32(2)55(33(3)4)64(61-28-14-27-49)63-42-40(62-47(43(42)59-7)54-31-52-41-44(50-30-51-45(41)54)53-46(56)34-15-10-8-11-16-34)29-60-48(35-17-12-9-13-18-35,36-19-23-38(57-5)24-20-36)37-21-25-39(58-6)26-22-37/h8-13,15-26,30-33,40,42-43,47H,14,28-29H2,1-7H3,(H,50,51,53,56)/t40-,42-,43+,47-,64?/m1/s1

Synonyms: DMTr-2'-ara-OMe-A(Bz)-3'-CE-Phosphoramidite; 2'-OMe-A(Bz)-ANA-CE-Phosphoramidite; Benzamide, N-[9-[5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-methyl-β-D-arabinofuranosyl]-9H-purin-6-yl]-; (2R,3R,4S,5R)-5-(6-benzamido-9H-purin-9-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-methoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite; 5'-O-DMTr-2'-ara-OMe-A(Bz)-3'-CE-Phosphoramidite; N6-benzoyl-(5'-O-(4,4'-dimethoxytrityl)-2'-O-methyl-arabinoadenosine-3'-[(2-cyanoethyl)-(N, N-diisopropropyl)]-Phosphoramidite

Storage: Store at -20 °C

InChIKey: IHMRCPNOGYPCLE-BZSGYPRQSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: N#CCCOP(OC(C)C(NC(=O)CN1C=NC=2C(=NC=NC21)NC(=O)C=3C=CC=CC3)COC(C=4C=CC=CC4)(C5=CC=C(OC)C=C5)C6=CC=C(OC)C=C6)N(C(C)C)C(C)C

IUPAC Name: (2R,3R)-3-(2-(6-benzamido-9H-purin-9-yl)acetamido)-4-(bis(4-methoxyphenyl)(phenyl)methoxy)butan-2-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C48H55N8O7P/c1-33(2)56(34(3)4)64(62-28-14-27-49)63-35(5)42(53-43(57)29-55-32-52-44-45(50-31-51-46(44)55)54-47(58)36-15-10-8-11-16-36)30-61-48(37-17-12-9-13-18-37,38-19-23-40(59-6)24-20-38)39-21-25-41(60-7)26-22-39/h8-13,15-26,31-35,42H,14,28-30H2,1-7H3,(H,53,57)(H,50,51,54,58)/t35-,42-,64?/m1/s1

Synonyms: Phosphoramidous acid, N,N-bis(1-methylethyl)-, (1R,2R)-2-[[2-[6-(benzoylamino)-9H-purin-9-yl]acetyl]amino]-3-[bis(4-methoxyphenyl)phenylmethoxy]-1-methylpropyl 2-cyanoethyl ester; (1R,2R)-2-[[2-[6-(Benzoylamino)-9H-purin-9-yl]acetyl]amino]-3-[bis(4-methoxyphenyl)phenylmethoxy]-1-methylpropyl 2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite

Storage: Store at -20 °C

InChIKey: UVIALSKMICAVNV-ZQRHXHOESA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1O[Si](C)(C)C(C)(C)C)N2C=C(C(=NC2=O)NC(=O)C3=CC=CC=C3)I)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC

IUPAC Name: N-[1-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-3-[tert-butyl(dimethyl)silyl]oxy-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-2-yl]-5-iodo-2-oxopyrimidin-4-yl]benzamide

InChI: InChI=1S/C52H65IN5O9PSi/c1-35(2)58(36(3)4)68(64-32-18-31-54)66-45-44(34-63-52(38-21-16-13-17-22-38,39-23-27-41(61-8)28-24-39)40-25-29-42(62-9)30-26-40)65-49(46(45)67-69(10,11)51(5,6)7)57-33-43(53)47(56-50(57)60)55-48(59)37-19-14-12-15-20-37/h12-17,19-30,33,35-36,44-46,49H,18,32,34H2,1-11H3,(H,55,56,59,60)/t44-,45-,46-,49-,68?/m1/s1

Synonyms: Cytidine, N-benzoyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-O-[(1,1-dimethylethyl)dimethylsilyl]-5-iodo-, 3'-[2-cyanoethyl bis(1-methylethyl)phosphoramidite]; (2R,3R,4R,5R)-5-(4-benzamido-5-iodo-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite; 5-Iodo Cytidine CED phosphoramidite; 5-Iodo 2'-TBDMS C(Bz) 3'-CE phosphoramidite

Storage: Store at -20 °C

InChIKey: SGBFUZIGEGJKFA-SAAFSQBVSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: N#CCCOP(OC1C(OC(C2=CN=C(N=CN(C)C)NC2=O)C1OC)COC(C=3C=CC=CC3)(C4=CC=C(OC)C=C4)C5=CC=C(OC)C=C5)N(C(C)C)C(C)C

IUPAC Name: (2R,3R,4S,5S)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-5-(2-(((dimethylamino)methylene)amino)-6-oxo-1,6-dihydropyrimidin-5-yl)-4-methoxytetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C43H55N6O8P/c1-29(2)49(30(3)4)58(55-25-13-24-44)57-39-37(56-38(40(39)53-9)36-26-45-42(47-41(36)50)46-28-48(5)6)27-54-43(31-14-11-10-12-15-31,32-16-20-34(51-7)21-17-32)33-18-22-35(52-8)23-19-33/h10-12,14-23,26,28-30,37-40H,13,25,27H2,1-9H3,(H,45,47,50)/t37-,38+,39-,40+,58?/m1/s1

Synonyms: Methanimidamide, N'-[5-[5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-methyl-β-D-ribofuranosyl]-1,4-dihydro-4-oxo-2-pyrimidinyl]-N,N-dimethyl-; Phosphoramidous acid, bis(1-methylethyl)-, mono(2-cyanoethyl) ester, ester with N'-[5-[5-O-[bis(4-methoxyphenyl)phenylmethyl]-2-O-methyl-β-D-ribofuranosyl]-1,4-dihydro-4-oxo-2-pyrimidinyl]-N,N-dimethylmethanimidamide

Storage: Store at -20 °C

InChIKey: LSKHQLXTKWPBJC-LHBYQZGQSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: N#CCCOP(OC1C(OC(C2=CN=C(N=CN(C)C)NC2=O)C1O[Si](C)(C)C(C)(C)C)COC(C=3C=CC=CC3)(C4=CC=C(OC)C=C4)C5=CC=C(OC)C=C5)N(C(C)C)C(C)C

IUPAC Name: (2R,3R,4S,5S)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)-5-(2-(((dimethylamino)methylene)amino)-6-oxo-1,6-dihydropyrimidin-5-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C48H67N6O8PSi/c1-33(2)54(34(3)4)63(59-29-17-28-49)61-43-41(60-42(44(43)62-64(12,13)47(5,6)7)40-30-50-46(52-45(40)55)51-32-53(8)9)31-58-48(35-18-15-14-16-19-35,36-20-24-38(56-10)25-21-36)37-22-26-39(57-11)27-23-37/h14-16,18-27,30,32-34,41-44H,17,29,31H2,1-13H3,(H,50,52,55)/t41-,42+,43-,44+,63?/m1/s1

Synonyms: Methanimidamide, N'-[5-[5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-[(1,1-dimethylethyl)dimethylsilyl]-β-D-ribofuranosyl]-1,6-dihydro-6-oxo-2-pyrimidinyl]-N,N-dimethyl-; N'-[5-[5-O-[Bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-2-O-[(1,1-dimethylethyl)dimethylsilyl]-β-D-ribofuranosyl]-1,6-dihydro-6-oxo-2-pyrimidinyl]-N,N-dimethylmethanimidamide

Storage: Store at -20 °C

InChIKey: GTLRVZNKJSCYOV-UHFFFAOYSA-M

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC1(C)C(C=CC=C2N(CCCOP(OCCC#N)N(C(C)C)C(C)C)C3=C(C=CC=C3)C2(C)C)=[N+](CCCOC(C4=CC=CC=C4)(C5=CC=C(OC)C=C5)C6=CC=CC=C6)C7=C1C=CC=C7.[I-]

IUPAC Name: 2-(3-(1-(3-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)propyl)-3,3-dimethylindolin-2-ylidene)prop-1-en-1-yl)-1-(3-((4-methoxyphenyl)diphenylmethoxy)propyl)-3,3-dimethyl-3H-indol-1-ium;iodide

InChI: InChI=1S/C58H70N4O4P.HI/c1-44(2)62(45(3)4)67(65-42-21-38-59)66-43-23-40-61-53-31-19-17-29-51(53)57(7,8)55(61)33-20-32-54-56(5,6)50-28-16-18-30-52(50)60(54)39-22-41-64-58(46-24-12-10-13-25-46,47-26-14-11-15-27-47)48-34-36-49(63-9)37-35-48;/h10-20,24-37,44-45H,21-23,39-43H2,1-9H3;1H/q+1;/p-1

Synonyms: 3H-Indolium, 2-[3-[1-[3-[[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]oxy]propyl]-1,3-dihydro-3,3-dimethyl-2H-indol-2-ylidene]-1-propen-1-yl]-1-[3-[(4-methoxyphenyl)diphenylmethoxy]propyl]-3,3-dimethyl-, iodide (1:1); Cyanine 3 amidite

Related CAS: 182873-76-3 (chloride) ; 718594-66-2 (free base)

Storage: Store at -20 °C

InChIKey: ALWJTTIHWFLNHB-ABEMJPNPSA-N

Solubility: Soluble in Acetonitrile, DMF

CanonicalSMILES: CC1=CN(C(=O)N=C1NC(=O)C2=CC=CC=C2)C3C4C(C(O3)(CCO4)COC(C5=CC=CC=C5)(C6=CC=C(C=C6)OC)C7=CC=C(C=C7)OC)OP(N(C(C)C)C(C)C)OCCC#N

IUPAC Name: N-[1-[(1R,5R,7R,8S)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-8-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-2,6-dioxabicyclo[3.2.1]octan-7-yl]-5-methyl-2-oxopyrimidin-4-yl]benzamide

InChI: InChI=1S/C49H56N5O9P/c1-33(2)54(34(3)4)64(61-29-14-28-50)63-43-42-46(53-31-35(5)44(52-47(53)56)51-45(55)36-15-10-8-11-16-36)62-48(43,27-30-59-42)32-60-49(37-17-12-9-13-18-37,38-19-23-40(57-6)24-20-38)39-21-25-41(58-7)26-22-39/h8-13,15-26,31,33-34,42-43,46H,14,27,29-30,32H2,1-7H3,(H,51,52,55,56)/t42-,43+,46-,48-,64?/m1/s1

Synonyms: Benzamide, N-[1-[2,6-anhydro-4-C-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-5-deoxy-α-L-lyxo-hexofuranosyl]-1,2-dihydro-5-methyl-2-oxo-4-pyrimidinyl]-; ENA-5MeC (bz) Phosphoramidite; (1R,5R,7R,8S)-7-(4-benzamido-5-methyl-2-oxopyrimidin-1(2H)-yl)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-2,6-dioxabicyclo[3.2.1]octan-8-yl (2-cyanoethyl) diisopropylphosphoramidite

Storage: Store at -20 °C

InChIKey: UXKOVGOMMGRMCZ-GIEZTROHSA-N

Solubility: Soluble in Acetonitrile, DMF

IUPAC Name: (1R,5R,7R,8S)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-7-(4-(((dimethylamino)methylene)amino)-5-methyl-2-oxopyrimidin-1(2H)-yl)-2,6-dioxabicyclo[3.2.1]octan-8-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C45H57N6O8P/c1-31(2)51(32(3)4)60(57-26-13-25-46)59-40-39-42(50-28-33(5)41(48-43(50)52)47-30-49(6)7)58-44(40,24-27-55-39)29-56-45(34-14-11-10-12-15-34,35-16-20-37(53-8)21-17-35)36-18-22-38(54-9)23-19-36/h10-12,14-23,28,30-32,39-40,42H,13,24,26-27,29H2,1-9H3/t39-,40+,42-,44-,60?/m1/s1

Synonyms: ENA MeC(dmf) Phosphoramidite