Phosphoramidites

Storage: Store at -20 °C

InChIKey: DVWHOVJDNIOLBR-NDSIFBHOSA-N

Solubility: Soluble in Anhydrous Acetonitrile

IUPAC Name: 2-(3-(5-((R)-1,2-dithiolan-3-yl)pentanamido)propanamido)-3-(bis(4-methoxyphenyl)(phenyl)methoxy)propyl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C44H61N4O7PS2/c1-33(2)48(34(3)4)56(54-29-12-27-45)55-32-38(47-43(50)25-28-46-42(49)16-11-10-15-41-26-30-57-58-41)31-53-44(35-13-8-7-9-14-35,36-17-21-39(51-5)22-18-36)37-19-23-40(52-6)24-20-37/h7-9,13-14,17-24,33-34,38,41H,10-12,15-16,25-26,28-32H2,1-6H3,(H,46,49)(H,47,50)/t38?,41-,56?/m1/s1

Synonyms: 3-Dimethoxytrityloxy-2-(3-((R)-α-lipoamido)propanamido)propyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite

Storage: Store at -20°C

InChIKey: FKQJXAHANDDQSD-IKNNSCCISA-N

Solubility: Soluble in Anhydrous Acetonitrile

CanonicalSMILES: N#CCCOP(OCC(NC(=O)CCNC(=O)CCCCC1SCC2N(C(=O)NC12)C(=O)C3=CC=C(C=C3)C(C)(C)C)COC(C=4C=CC=CC4)(C5=CC=C(OC)C=C5)C6=CC=C(OC)C=C6)N(C(C)C)C(C)C

IUPAC Name: 3-(bis(4-methoxyphenyl)(phenyl)methoxy)-2-(3-(5-((3aS,4S,6aR)-1-(4-(tert-butyl)benzoyl)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)propanamido)propyl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C57H75N6O9PS/c1-39(2)63(40(3)4)73(71-35-15-33-58)72-37-46(36-70-57(43-16-11-10-12-17-43,44-24-28-47(68-8)29-25-44)45-26-30-48(69-9)31-27-45)60-52(65)32-34-59-51(64)19-14-13-18-50-53-49(38-74-50)62(55(67)61-53)54(66)41-20-22-42(23-21-41)56(5,6)7/h10-12,16-17,20-31,39-40,46,49-50,53H,13-15,18-19,32,34-38H2,1-9H3,(H,59,64)(H,60,65)(H,61,67)/t46?,49-,50-,53-,73?/m0/s1

Synonyms: 3-Dimethoxytrityloxy-2-(3-((4-t-butylbenzoyl)-biotinyl)propanamido)propyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite; 3-[Bis(4-methoxyphenyl)phenylmethoxy]-2-[[3-[[5-[(3aS,4S,6aR)-1-[4-(1,1-dimethylethyl)benzoyl]hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl]-1-oxopentyl]amino]-1-oxopropyl]amino]propyl 2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite; Phosphoramidous acid, N,N-bis(1-methylethyl)-, 3-[bis(4-methoxyphenyl)phenylmethoxy]-2-[[3-[[5-[(3aS,4S,6aR)-1-[4-(1,1-dimethylethyl)benzoyl]hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl]-1-oxopentyl]amino]-1-oxopropyl]amino]propyl 2-cyanoethyl ester

Storage: Store at -20°C

InChIKey: GIUBJQWDYGXGQR-UHFFFAOYSA-N

Solubility: Soluble in Anhydrous Acetonitrile

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCC(COC(C1=CC=CC=C1)(C2=CC=C(C=C2)OC)C3=CC=C(C=C3)OC)NC(=O)CCNC(=O)C4=CC5=C(C=C4)C(=O)OC56C7=C(C=C(C=C7)OC(=O)C(C)(C)C)OC8=C6C=CC(=C8)OC(=O)C(C)(C)C

IUPAC Name: [6-[[3-[[1-[bis(4-methoxyphenyl)-phenylmethoxy]-3-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxypropan-2-yl]amino]-3-oxopropyl]carbamoyl]-6'-(2,2-dimethylpropanoyloxy)-3-oxospiro[2-benzofuran-1,9'-xanthene]-3'-yl] 2,2-dimethylpropanoate

InChI: InChI=1S/C67H75N4O14P/c1-42(2)71(43(3)4)86(80-36-16-34-68)81-41-48(40-79-66(45-17-14-13-15-18-45,46-20-24-49(77-11)25-21-46)47-22-26-50(78-12)27-23-47)70-59(72)33-35-69-60(73)44-19-30-53-56(37-44)67(85-61(53)74)54-31-28-51(82-62(75)64(5,6)7)38-57(54)84-58-39-52(29-32-55(58)67)83-63(76)65(8,9)10/h13-15,17-32,37-39,42-43,48H,16,33,35-36,40-41H2,1-12H3,(H,69,73)(H,70,72)

Synonyms: 3-Dimethoxytrityloxy-2-(3-(6-carboxy-(di-O-pivaloyl-fluorescein)propanamido)propyl)-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite; Propanoic acid, 2,2-dimethyl-, 1,1'-[6-[7-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-[bis(1-methylethyl)amino]-13-cyano-1,5-dioxo-9,11-dioxa-2,6-diaza-10-phosphatridec-1-yl]-3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthene]-3',6'-diyl] ester; 1,1'-[6-[7-[[Bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-[bis(1-methylethyl)amino]-13-cyano-1,5-dioxo-9,11-dioxa-2,6-diaza-10-phosphatridec-1-yl]-3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthene]-3',6'-diyl] bis(2,2-dimethylpropanoate)

Storage: Store at -20°C

InChIKey: LLAFADMXMWCLJQ-XRKNHYQJSA-N

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCC(COC(C1=CC=CC=C1)(C2=CC=C(C=C2)OC)C3=CC=C(C=C3)OC)NC(=O)COCC(=O)NCCCOCCOCCOCCCNC(=O)CCCCC4C5C(CS4)N(C(=O)N5)C(=O)C6=CC=C(C=C6)C(C)(C)C

IUPAC Name: 2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-28-((3aS,4S,6aR)-1-(4-(tert-butyl)benzoyl)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-4,8,24-trioxo-6,13,16,19-tetraoxa-3,9,23-triazaoctacosyl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C68H96N7O14PS/c1-49(2)75(50(3)4)90(88-39-15-34-69)89-45-56(44-87-68(53-18-11-10-12-19-53,54-26-30-57(81-8)31-27-54)55-28-32-58(82-9)33-29-55)72-63(78)47-86-46-62(77)71-36-17-38-84-41-43-85-42-40-83-37-16-35-70-61(76)21-14-13-20-60-64-59(48-91-60)74(66(80)73-64)65(79)51-22-24-52(25-23-51)67(5,6)7/h10-12,18-19,22-33,49-50,56,59-60,64H,13-17,20-21,35-48H2,1-9H3,(H,70,76)(H,71,77)(H,72,78)(H,73,80)/t56?,59-,60-,64-,90?/m0/s1

Synonyms: 3-Dimethoxytrityloxy-2-(3-((4-t-butylbenzoyl)-biotinyl-3-aminopropyl)-diethyleneglycolyl-propylamido-glycanoylamido)propyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite

Storage: Store at -20°C

Boiling Point: 938.0±65.0 °C at 760 mmHg

InChIKey: AYVWOMBHOQDZKA-UHFFFAOYSA-N

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OCC(COC(C1=CC=CC=C1)(C2=CC=C(C=C2)OC)C3=CC=C(C=C3)OC)NC(=O)CCNC(=O)OCC4C5=CC=CC=C5C6=CC=CC=C46

IUPAC Name: 9H-fluoren-9-ylmethyl N-[3-[[1-[bis(4-methoxyphenyl)-phenylmethoxy]-3-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxypropan-2-yl]amino]-3-oxopropyl]carbamate

InChI: InChI=1S/C51H59N4O8P/c1-36(2)55(37(3)4)64(62-32-14-30-52)63-34-41(54-49(56)29-31-53-50(57)60-35-48-46-19-12-10-17-44(46)45-18-11-13-20-47(45)48)33-61-51(38-15-8-7-9-16-38,39-21-25-42(58-5)26-22-39)40-23-27-43(59-6)28-24-40/h7-13,15-28,36-37,41,48H,14,29,31-35H2,1-6H3,(H,53,57)(H,54,56)

Synonyms: 3-Dimethoxytrityloxy-2-(3-(fluorenylmethoxycarbonylamino)propanamido)propyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite; 9-Oxa-2,6,11-triaza-10-phosphatridecanoic acid, 7-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-(2-cyanoethoxy)-12-methyl-11-(1-methylethyl)-5-oxo-, 9H-fluoren-9-ylmethyl ester; 9,11-Dioxa-2,6-diaza-10-phosphatridecanoic acid, 7-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-[bis(1-methylethyl)amino]-13-cyano-5-oxo-, 9H-fluoren-9-ylmethyl ester; 9H-Fluoren-9-ylmethyl 7-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-10-(2-cyanoethoxy)-12-methyl-11-(1-methylethyl)-5-oxo-9-oxa-2,6,11-triaza-10-phosphatridecanoate

Storage: Store at -20°C

InChIKey: VOACHPAMSJFKOH-UHFFFAOYSA-N

CanonicalSMILES: O=C(NC(COP(OCCC#N)N(C(C)C)C(C)C)COC(C1=CC=C(OC)C=C1)(C2=CC=C(OC)C=C2)C3=CC=CC=C3)CCCCC(N4C(C=CC=C5)=C5C#CC(C=CC=C6)=C6C4)=O

InChI: InChI=1S/C54H61N4O7P/c1-40(2)58(41(3)4)66(64-36-16-35-55)65-39-48(38-63-54(45-20-8-7-9-21-45,46-27-31-49(61-5)32-28-46)47-29-33-50(62-6)34-30-47)56-52(59)23-14-15-24-53(60)57-37-44-19-11-10-17-42(44)25-26-43-18-12-13-22-51(43)57/h7-13,17-22,27-34,40-41,48H,14-16,23-24,36-39H2,1-6H3,(H,56,59)

Synonyms: 3-Dimethoxytrityloxy-2-(6-oxo-6-(dibenzo[b,f]azacyclooct-4-yn-1-yl)-capramido)propyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite

Storage: Store at -20 °C

InChIKey: HWVZOGDVVZLMFF-AKCAFWOHSA-N

Solubility: Soluble in Anhydrous Acetonitrile

CanonicalSMILES: N#CCCOP(OC(C)C(NC(=O)C1=CC=C(N=NC=2C=CC=CC2)C=C1)COC(C=3C=CC=CC3)(C4=CC=C(OC)C=C4)C5=CC=C(OC)C=C5)N(C(C)C)C(C)C

IUPAC Name: (2S,3S)-4-(bis(4-methoxyphenyl)(phenyl)methoxy)-3-(4-(phenyldiazenyl)benzamido)butan-2-yl (2-cyanoethyl) diisopropylphosphoramidite

InChI: InChI=1S/C47H54N5O6P/c1-34(2)52(35(3)4)59(57-32-14-31-48)58-36(5)45(49-46(53)37-19-25-42(26-20-37)51-50-41-17-12-9-13-18-41)33-56-47(38-15-10-8-11-16-38,39-21-27-43(54-6)28-22-39)40-23-29-44(55-7)30-24-40/h8-13,15-30,34-36,45H,14,32-33H2,1-7H3,(H,49,53)/t36-,45-,59?/m0/s1

Synonyms: 3-O-(Dimethoxytrityl)-2-N-(4-carboxyazobenzene)-D-threonin-1-yl-O-[(2-cyanoethyl)-(N,N-diisopropyl)]-phosphoramidite; Phosphoramidous acid, N,N-bis(1-methylethyl)-, (1S,2S)-3-[bis(4-methoxyphenyl)phenylmethoxy]-1-methyl-2-[[4-(2-phenyldiazenyl)benzoyl]amino]propyl 2-cyanoethyl ester; (1S,2S)-3-[Bis(4-methoxyphenyl)phenylmethoxy]-1-methyl-2-[[4-(2-phenyldiazenyl)benzoyl]amino]propyl 2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite

Storage: Store at -20 °C

InChIKey: WPCMEEMVKXSQGE-UHFFFAOYSA-N

Solubility: Soluble in acetonitrile and DCM

CanonicalSMILES: CC(C)N(C(C)C)P(OCCCCCCNC(=O)C1=CC(=C2C(=C1Cl)C3(C4=C(C=C(C(=C4)C5=CC=CC=C5)OC(=O)C(C)(C)C)OC6=C3C=C(C(=C6)OC(=O)C(C)(C)C)C7=CC=CC=C7)OC2=O)Cl)OCCC#N

IUPAC Name: [4,7-dichloro-6-[6-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyhexylcarbamoyl]-6'-(2,2-dimethylpropanoyloxy)-3-oxo-2',7'-diphenylspiro[2-benzofuran-1,9'-xanthene]-3'-yl] 2,2-dimethylpropanoate

InChI: InChI=1S/C58H64Cl2N3O10P/c1-35(2)63(36(3)4)74(69-29-21-26-61)68-28-20-12-11-19-27-62-52(64)41-32-44(59)49-50(51(41)60)58(73-53(49)65)42-30-39(37-22-15-13-16-23-37)45(71-54(66)56(5,6)7)33-47(42)70-48-34-46(72-55(67)57(8,9)10)40(31-43(48)58)38-24-17-14-18-25-38/h13-18,22-25,30-36H,11-12,19-21,27-29H2,1-10H3,(H,62,64)

Synonyms: 6-(4,7-Dichloro-2',7'-diphenyl-3',6'-dipivaloylfluorescein-6-carboxamido)-hexyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite; Propanoic acid, 2,2-dimethyl-, 1,1'-[6-[10-[bis(1-methylethyl)amino]-13-cyano-1-oxo-9,11-dioxa-2-aza-10-phosphatridec-1-yl]-4,7-dichloro-3-oxo-2',7'-diphenylspiro[isobenzofuran-1(3H),9'-[9H]xanthene]-3',6'-diyl] ester; 1,1'-[6-[10-[Bis(1-methylethyl)amino]-13-cyano-1-oxo-9,11-dioxa-2-aza-10-phosphatridec-1-yl]-4,7-dichloro-3-oxo-2',7'-diphenylspiro[isobenzofuran-1(3H),9'-[9H]xanthene]-3',6'-diyl] bis(2,2-dimethylpropanoate); SIMA; SIMA phosphoramidite, 6-isomer

Storage: Store at -20 °C

InChIKey: ZRDCBBFLELRHPG-OGAYPNLZSA-N

Solubility: Soluble in Anhydrous Acetonitrile

CanonicalSMILES: N#CCCOP(OC1CN(C(=O)CCC2=CC3=NC=4C=CC(OC(=O)C(C)(C)C)=CC4OC3=CC2=O)C(COC(C=5C=CC=CC5)(C6=CC=C(OC)C=C6)C7=CC=C(OC)C=C7)C1)N(C(C)C)C(C)C

IUPAC Name: 2-(3-((2S,4R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)pyrrolidin-1-yl)-3-oxopropyl)-3-oxo-3H-phenoxazin-7-yl pivalate

InChI: InChI=1S/C55H63N4O10P/c1-36(2)59(37(3)4)70(66-29-13-28-56)69-46-31-42(35-65-55(39-14-11-10-12-15-39,40-17-21-43(63-8)22-18-40)41-19-23-44(64-9)24-20-41)58(34-46)52(61)27-16-38-30-48-51(33-49(38)60)68-50-32-45(25-26-47(50)57-48)67-53(62)54(5,6)7/h10-12,14-15,17-26,30,32-33,36-37,42,46H,13,16,27,29,31,34-35H2,1-9H3/t42-,46+,70?/m0/s1

Synonyms: 3-(3-oxo-7-pivaloylphenoxazin-2-yl)-propanamido-1-(2-O-dimethoxytrityloxymethyl)-pyrrolidin-4-yl-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite; Propanoic acid, 2,2-dimethyl-, 2-[3-[(2S,4R)-2-[[bis(4-methoxyphenyl)phenylmethoxy]methyl]-4-[[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]oxy]-1-pyrrolidinyl]-3-oxopropyl]-3-oxo-3H-phenoxazin-7-yl ester; 2-[3-[(2S,4R)-2-[[Bis(4-methoxyphenyl)phenylmethoxy]methyl]-4-[[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]oxy]-1-pyrrolidinyl]-3-oxopropyl]-3-oxo-3H-phenoxazin-7-yl 2,2-dimethylpropanoate

Storage: Store at -20°C

InChIKey: DWHRLIUARJHFGF-UHFFFAOYSA-O

CanonicalSMILES: N#CCCOP(OCCCCCCOP(=O)(OCCCCNC(=O)C(F)(F)F)C=1C=CC(C(=O)N(CC)CC)=C(C1)C=2C=3C=C4C5=C(C3[O+]=C6C2C=C7C8=C6CCCN8CCC7)CCCN5CCC4)N(C(C)C)C(C)C.[F-][P+5]([F-])([F-])([F-])([F-])[F-]

InChI: InChI=1S/C57H77F3N6O8P2.F6P/c1-7-63(8-2)55(67)44-25-24-43(76(69,73-35-14-11-27-62-56(68)57(58,59)60)72-34-13-10-9-12-32-70-75(71-33-19-26-61)66(39(3)4)40(5)6)38-47(44)50-48-36-41-20-15-28-64-30-17-22-45(51(41)64)53(48)74-54-46-23-18-31-65-29-16-21-42(52(46)65)37-49(50)54;1-7(2,3,4,5)6/h24-25,36-40H,7-23,27-35H2,1-6H3;/q;-1/p+1

Synonyms: 6-[2,3,6,7,12,13,16,17-Octohydro-1H,5H,11H,15H-Xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium-9-yl-[(2-diethylaminocarbonyl)-phen-4-yl][trifluoroacetylaminobutoxy]phosphoryl][oxy]]-hexyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite,hexafluorophosphate salt; 1H,5H,11H,15H-Quinolizino[1',9':5,6,7]xantheno[2,3,4-ij]quinolizin-18-ium, 9-[5-[10-[bis(1-methylethyl)amino]-13-cyano-1-oxido-1-[4-[(2,2,2-trifluoroacetyl)amino]butoxy]-2,9,11-trioxa-1,10-diphosphatridec-1-yl]-2-[(diethylamino)carbonyl]phenyl]-2,3,6,7,12,13,16,17-octahydro-, hexafluorophosphate(1-) (1:1)

Related CAS: 2378004-16-9 (free base)

Storage: Store at -20°C

InChIKey: QDVVHDWLKVWLFU-UHFFFAOYSA-N

CanonicalSMILES: CC(C)N(C(C)C)P(OCCCCCCOC1=C(C=C2CCCN3C2=C1CCC3)N=NC4=C(C=C(C(=C4)OC)N=NC5=CC=C(C=C5)[N+](=O)[O-])OC)OCCC#N

IUPAC Name: 3-[6-[[7-[[2,5-dimethoxy-4-[(4-nitrophenyl)diazenyl]phenyl]diazenyl]-1-azatricyclo[7.3.1.05,13]trideca-5(13),6,8-trien-6-yl]oxy]hexoxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile

InChI: InChI=1S/C41H55N8O7P/c1-29(2)48(30(3)4)57(56-25-13-20-42)55-24-10-8-7-9-23-54-41-34-15-12-22-47-21-11-14-31(40(34)47)26-37(41)46-45-36-28-38(52-5)35(27-39(36)53-6)44-43-32-16-18-33(19-17-32)49(50)51/h16-19,26-30H,7-15,21-25H2,1-6H3

Synonyms: 5'-BBQ-650 CEP; 9-[4-Nitro-2',5'-dimethoxy-azobenz-4'-yl)-diazo]-julolidine-8]-O-hexyl-[2-cyanoethyl-(N,N-diisopropyl)]-phosphoramidite; 5'-BBQ-650 CE-Phosphoramidite; Phosphoramidous acid, N,N-bis(1-methylethyl)-, 2-cyanoethyl 6-[[9-[2-[2,5-dimethoxy-4-[2-(4-nitrophenyl)diazenyl]phenyl]diazenyl]-2,3,6,7-tetrahydro-1H,5H-benzo[ij]quinolizin-8-yl]oxy]hexyl ester; 2-Cyanoethyl 6-[[9-[2-[2,5-dimethoxy-4-[2-(4-nitrophenyl)diazenyl]phenyl]diazenyl]-2,3,6,7-tetrahydro-1H,5H-benzo[ij]quinolizin-8-yl]oxy]hexyl N,N-bis(1-methylethyl)phosphoramidite

Storage: Store at -20°C

InChIKey: JREHZANXZDRQFA-UHFFFAOYSA-N

CanonicalSMILES: CC(N(P(OCCC#N)OCCCCCCOP(C1=CC(C(N(C)CCS(=O)([O-])=O)=O)=C(C(C2=C3C4=C5C(C(C)=CC(C)(C)N5CCC4)=C2)=C6C=C7C(C)=CC(C)(C)N8CCCC(C6=[O+]3)=C78)C(Cl)=C1)(OCCCCNC(C(F)(F)F)=O)=O)C(C)C)C

InChI: InChI=1S/C62H82ClF3N6O11P2S/c1-39(2)72(40(3)4)84(80-29-20-23-67)79-28-15-12-13-16-30-81-85(75,82-31-17-14-24-68-59(74)62(64,65)66)43-33-50(58(73)69(11)27-32-86(76,77)78)53(51(63)34-43)52-48-35-46-41(5)37-60(7,8)70-25-18-21-44(54(46)70)56(48)83-57-45-22-19-26-71-55(45)47(36-49(52)57)42(6)38-61(71,9)10/h33-40H,12-22,24-32H2,1-11H3,(H-,68,74,76,77,78)

Synonyms: 6-[2,3,16,17-tetrahydro-5,5,7,11,13,13-hexamethyl-1H,5H,13H,15H-Xantheno[2,3,4-ij:5,6,7-i'j']diquinolizin-18-ium-9-yl-[2-chloro-6-(N-hydroxysulfonylethyl-N'-methylaminocarbonyl)-phen-4-yl][trifluoroacetylaminobutoxy]phosphoryl][oxy]-hexyl-1-O-(2-cyanoethyl)-(N,N-diisopropyl)-phosphoramidite

Storage: Store at -20°C

InChIKey: LMAFXDVQHZECFP-UHFFFAOYSA-M

CanonicalSMILES: CCCCN(C1=CC2=[S+]C3=CC(N(CCCC)CCOC(C4=CC=CC=C4)(C5=CC=C(OC)C=C5)C6=CC=C(OC)C=C6)=CC=C3N=C2C=C1)CCOP(OCCC#N)N(C(C)C)C(C)C.[Cl-]

IUPAC Name: 3-((2-(bis(4-methoxyphenyl)(phenyl)methoxy)ethyl)(butyl)amino)-7-(butyl(2-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)ethyl)amino)phenothiazin-5-ium;chloride

InChI: InChI=1S/C54H69N5O5PS.ClH/c1-9-11-32-57(34-37-62-54(43-17-14-13-15-18-43,44-19-25-48(60-7)26-20-44)45-21-27-49(61-8)28-22-45)46-23-29-50-52(39-46)66-53-40-47(24-30-51(53)56-50)58(33-12-10-2)35-38-64-65(63-36-16-31-55)59(41(3)4)42(5)6;/h13-15,17-30,39-42H,9-12,16,32-38H2,1-8H3;1H/q+1;/p-1

Synonyms: 3-Butyl-3-[2-(2-cyanoethyl)(N,N-diisopropyl)phosphoramidityl)ethyl]amino-7-(2-(4,4'-dimethoxytrityloxy)ethyl)-7-(butylamino)phenothiazin-5-ium chloride

Storage: Store at 2-8°C under inert atmosphere

Density: 0.949 g/mL at 25°C

Boiling Point: 298.1±0.0°C at 760 mmHg

InChIKey: RKVHNYJPIXOHRW-UHFFFAOYSA-N

Solubility: Soluble in Acetonitrile (Slightly), Benzene, Chloroform (Slightly), Methanol (Slightly)

CanonicalSMILES: CC(C)N(C(C)C)P(N(C(C)C)C(C)C)OCCC#N

IUPAC Name: 3-bis[di(propan-2-yl)amino]phosphanyloxypropanenitrile

InChI: InChI=1S/C15H32N3OP/c1-12(2)17(13(3)4)20(19-11-9-10-16)18(14(5)6)15(7)8/h12-15H,9,11H2,1-8H3

Synonyms: N,N,N',N'-Tetrakis(1-methylethyl)phosphorodiamidous Acid 2-Cyanoethyl Ester; 2-Cyanoethoxy bis(N,N-diisopropylamino)phosphine; 2-Cyanoethyl Tetraisopropylphosphorodiamidite; Bis(diisopropylamino)(2-cyanoethoxy)phosphine; 3-((Bis(diisopropylamino)phosphino)oxy)propanenitrile

Storage: Store at -20 °C

InChIKey: AGWGPRXHCUPJJO-VCGWOZLGSA-N

CanonicalSMILES: CC(C)C(=O)NC1=NC2=C(C(=O)N1)N=CN2C3C(C(C(O3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC)OP(N(C(C)C)C(C)C)OCCC#N)OCC#C

IUPAC Name: N-[9-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-prop-2-ynoxyoxolan-2-yl]-6-oxo-1H-purin-2-yl]-2-methylpropanamide

InChI: InChI=1S/C47H56N7O9P/c1-10-26-59-41-40(63-64(61-27-14-25-48)54(31(4)5)32(6)7)38(62-45(41)53-29-49-39-42(53)50-46(52-44(39)56)51-43(55)30(2)3)28-60-47(33-15-12-11-13-16-33,34-17-21-36(57-8)22-18-34)35-19-23-37(58-9)24-20-35/h1,11-13,15-24,29-32,38,40-41,45H,14,26-28H2,2-9H3,(H2,50,51,52,55,56)/t38-,40-,41-,45-,64?/m1/s1

Synonyms: 2'-O-Propynyl-ibu-rG phosphoramidite; N2-iBu-5'-O-DMTr-2'-O-propargylguanosine-3'-CED-phosphoramidite; N2-iso-Butyroyl-5'-O-(4,4'-dimethoxytrityl)-2'-O-propargyl guanosine-3'-O-[(2-cyanoethyl)-(N,N-diisopropyl)]phosphoramidite; 5'-O-DMT-N2-isobutyryl-2'-O-propynylguanosine 3'-CE phosphoramidite; 5'-​O-​[bis(4-methoxyphenyl)phenylmethyl]​-​N-​(2-​methyl-​1-​oxopropyl)​-​2'-​O-​2-​propynyl-​guanosine 3'-​[2-​cyanoethyl bis(1-​methylethyl)​phosphoramidite]; 5'-O-[Bis(4-methoxyphenyl)(phenyl)methyl]-3'-O-[(2-cyanoethoxy)(diisopropylamino)phosphino]-N-isobutyryl-2'-O-2-propyn-1-ylguanosine; DMTr-2'-O-propargyl-rG(iBu)-3'-CE-Phosphoramidite; 2'-O-Propargyl G(iBu)-3'-phosphoramidite; N2-iBu-DMT-2'-O-propargyl-G-CE-Phosphoramidite; 2'-O-propargyl Guanosine (n-ibu) CED phosphoramidite

Storage: Store at -20 °C

InChIKey: JIMYWWYYWAHJAD-ZMHKPELYSA-N

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OCC#C)N2C=CC(=NC2=O)NC(=O)C)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC

IUPAC Name: N-[1-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-3-prop-2-ynoxyoxolan-2-yl]-2-oxopyrimidin-4-yl]acetamide

InChI: InChI=1S/C44H52N5O9P/c1-9-27-54-41-40(58-59(56-28-13-25-45)49(30(2)3)31(4)5)38(57-42(41)48-26-24-39(46-32(6)50)47-43(48)51)29-55-44(33-14-11-10-12-15-33,34-16-20-36(52-7)21-17-34)35-18-22-37(53-8)23-19-35/h1,10-12,14-24,26,30-31,38,40-42H,13,27-29H2,2-8H3,(H,46,47,50,51)/t38-,40-,41-,42-,59?/m1/s1

Synonyms: DMTr-2'-O-propargyl-rC(Ac)-3'-CE-Phosphoramidite; N-​Acetyl-​5'-​O-​[bis(4-​methoxyphenyl)​phenylmethyl]​-​2'-​O-​2-​propyn-​1-​yl-​cytidine 3'-​[2-​cyanoethyl N,​N-​bis(1-​methylethyl)​phosphoramidite]; DMT-2'-O-propargyl-C(Ac)-CE-Phosphoramidite; Cytidine, N-acetyl-5'-O-[bis(4-methoxyphenyl)phenylmethyl]-2'-O-2-propyn-1-yl-, 3'-[2-cyanoethyl N,N-bis(1-methylethyl)phosphoramidite]; N4-Ac-DMT-2'-O-propargyl-C-CE-Phosphoramidite; [N4-acetyl--5'-O-(4,4'-dimethoxytrityl)-2'-O-propargyl-cytidine]-3'-[(2-cyanoethyl)-N,N-diisopropyl]phosphoramidite

Storage: Store at -20 °C

InChIKey: QZCUPWVSXYRPJB-UIRYRFQFSA-N

CanonicalSMILES: CC(C)N(C(C)C)P(OCCC#N)OC1C(OC(C1OC(=O)C)N2C=CC(=NC2=O)NC(=O)C3=CC=CC=C3)COC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC

IUPAC Name: [(2R,3S,4R,5R)-2-(4-benzamido-2-oxopyrimidin-1-yl)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-3-yl] acetate

InChI: InChI=1S/C48H54N5O10P/c1-32(2)53(33(3)4)64(60-30-14-28-49)63-43-41(62-46(44(43)61-34(5)54)52-29-27-42(51-47(52)56)50-45(55)35-15-10-8-11-16-35)31-59-48(36-17-12-9-13-18-36,37-19-23-39(57-6)24-20-37)38-21-25-40(58-7)26-22-38/h8-13,15-27,29,32-33,41,43-44,46H,14,30-31H2,1-7H3,(H,50,51,55,56)/t41-,43-,44+,46-,64?/m1/s1

Synonyms: DMTr-2'-ara-OAc-C(Bz)-3'-CE-Phosphoramidite; N-[1-[2-O-Acetyl-5-O-[bis(4-methoxyphenyl)phenylmethyl]-3-O-[[bis(1-methylethyl)amino](2-cyanoethoxy)phosphino]-β-D-arabinofuranosyl]-1,2-dihydro-2-oxo-4-pyrimidinyl]benzamide; (2R,3S,4R,5R)-2-(4-benzamido-2-oxopyrimidin-1(2H)-yl)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)tetrahydrofuran-3-yl acetate; N4-benzoyl-(5'-O-(4,4'-dimethoxytrityl)-2'-O-acetyl-arabinocytidine-3'-[(2-cyanoethyl)-(N,N-diisopropropyl)]-Phosphoramidite; 5'-O-DMTr-2'-ara-OAc-C(Bz)-3'-CE-Phosphoramidite; Cytosine Arabinoside

Storage: Store at -20 °C

Density: 1.36±0.1 g/cm3

InChIKey: WAHZVPMCAUKPIH-UHFFFAOYSA-N

CanonicalSMILES: CC(C)C(=O)NC1=NC2=C(C(=N1)OCCC3=CC=C(C=C3)[N+](=O)[O-])N=CN2C4CN(CC(O4)COP(=O)(N(C)C)Cl)C(C5=CC=CC=C5)(C6=CC=CC=C6)C7=CC=CC=C7

IUPAC Name: N-[9-[6-[[chloro(dimethylamino)phosphoryl]oxymethyl]-4-tritylmorpholin-2-yl]-6-[2-(4-nitrophenyl)ethoxy]purin-2-yl]-2-methylpropanamide

InChI: InChI=1S/C43H46ClN8O7P/c1-30(2)40(53)47-42-46-39-38(41(48-42)57-25-24-31-20-22-35(23-21-31)52(54)55)45-29-51(39)37-27-50(26-36(59-37)28-58-60(44,56)49(3)4)43(32-14-8-5-9-15-32,33-16-10-6-11-17-33)34-18-12-7-13-19-34/h5-23,29-30,36-37H,24-28H2,1-4H3,(H,46,47,48,53)

Synonyms: Morpholino o6-(p-nitrophenethyl) g monomer; O6-NPE-N2-iBu protected G PMO Monomer; (6-(2-isobutyramido-6-(4-nitrophenethoxy)-9H-purin-9-yl)-4-tritylmorpholin-2-yl)methyl dimethylphosphoramidochloridate

Related CAS: 2756846-27-0 ((2S,6R)-isomer)

Storage: Store at -20 °C

Density: 1.36±0.1 g/cm3

InChIKey: WAHZVPMCAUKPIH-BZIXDFOGSA-N

CanonicalSMILES: O=C(NC=1N=C(OCCC2=CC=C(C=C2)N(=O)=O)C=3N=CN(C3N1)C4OC(COP(=O)(Cl)N(C)C)CN(C4)C(C=5C=CC=CC5)(C=6C=CC=CC6)C=7C=CC=CC7)C(C)C

IUPAC Name: N-[9-[(2R,6S)-6-[[chloro(dimethylamino)phosphoryl]oxymethyl]-4-tritylmorpholin-2-yl]-6-[2-(4-nitrophenyl)ethoxy]purin-2-yl]-2-methylpropanamide

InChI: InChI=1S/C43H46ClN8O7P/c1-30(2)40(53)47-42-46-39-38(41(48-42)57-25-24-31-20-22-35(23-21-31)52(54)55)45-29-51(39)37-27-50(26-36(59-37)28-58-60(44,56)49(3)4)43(32-14-8-5-9-15-32,33-16-10-6-11-17-33)34-18-12-7-13-19-34/h5-23,29-30,36-37H,24-28H2,1-4H3,(H,46,47,48,53)/t36-,37+,60?/m0/s1

Synonyms: PMO G; Morpholino G subunit; ((2S,6R)-6-(2-Isobutyramido-6-(4-nitrophenethoxy)-9H-purin-9-yl)-4-tritylmorpholin-2-yl)methyl dimethylphosphoramidochloridate; O(6)-NPE-N(2)-iBu protected G PMO Monomer; (2S,6R)-N2-isobutyryl-O6-p-nitrophenethyl-9-(4'-trityl-6'-methoxy-(dimethylamino)(chloro)phosphate)-morpholin-2'-yl)-guanine

Related CAS: 2708274-72-8 (rel-isomer)

Density: 1.33±0.1 g/cm3

InChIKey: LNQQABQFAZWVNX-UHFFFAOYSA-N

CanonicalSMILES: CC(C)C(=O)NC1=NC2=C(C(=O)N1)N=CN2C3CN(CC(O3)CO)C(C4=CC=CC=C4)(C5=CC=CC=C5)C6=CC=CC=C6

IUPAC Name: N-[9-[6-(hydroxymethyl)-4-tritylmorpholin-2-yl]-6-oxo-1H-purin-2-yl]-2-methylpropanamide

InChI: InChI=1S/C33H34N6O4/c1-22(2)30(41)36-32-35-29-28(31(42)37-32)34-21-39(29)27-19-38(18-26(20-40)43-27)33(23-12-6-3-7-13-23,24-14-8-4-9-15-24)25-16-10-5-11-17-25/h3-17,21-22,26-27,40H,18-20H2,1-2H3,(H2,35,36,37,41,42)

Synonyms: 4-Trityl-6-[2-(isobutyrylamino)-6-oxo-1,6-dihydro-9H-purine-9-yl]morpholine-2-methanol; N-(9-(6-(Hydroxymethyl)-4-tritylmorpholin-2-yl)-6-oxo-6,9-dihydro-1H-purin-2-yl)isobutyramide; N2-Isobutyryl-N-trityl-morpholino guanine; N-[6,9-Dihydro-9-[6-(hydroxymethyl)-4-(triphenylmethyl)-2-morpholinyl]-6-oxo-1H-purin-2-yl]-2-methylpropanamide

Related CAS: 956139-24-5 (N-[6,9-Dihydro-9-[(2R,6S)-6-(hydroxymethyl)-4-(triphenylmethyl)-2-morpholinyl]-6-oxo-1H-purin-2-yl]-2-methylpropanamide)