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LNA-C(Ac)-CE Phosphoramidite

Catalog number: BRP-00389

LNA-C(Ac)-CE Phosphoramidite

LNA-C(Ac)-CE Phosphoramidite is a specialized nucleotide used in oligonucleotide synthesis. It features a locked nucleic acid (LNA) backbone with a cytosine base modified with an acetyl (Ac) group. Additionally, it contains a 5'-cyanoethyl (CE) phosphoramidite functionality for controlled addition during synthesis. LNAs are known for their enhanced hybridization properties and stability, and the acetyl modification further enhances these characteristics. This phosphoramidite is valuable in molecular biology research for applications requiring high specificity and affinity, such as antisense oligonucleotide therapy, SNP detection, and diagnostic assays.

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Catalog
BRP-00389
Synonyms
N6-Acetyl-5'-O-(4,4'-dimethoxytrityl)-LNA-cytidine-3'-cyanoethyl phosphoramidite; 5'-O-DMTr-2'-O-4'-C-Locked-C(Ac) Phosphoramidite; DMT-locC(Ac)Amidite; DMT-locC(Ac) phosphoramidite; DMTr-LNA-C(Ac)-3-CED-phosphoramidite; N6-Acetyl-5'-O-(4,4'-dimethoxytrityl)-2'-O-4'-C-Locked-cytidine-3'-cyanoethyl Phosphoramidite; LNA-C(Ac)-3-CED-phosphoramidite; Ac-C-LA-CE Phosphoramidite; DMTr-2'-O-4'-C-Locked-rC(Ac)-3'-CE-Phosphoramidite; N4-Acetyl-5'-O-[Bis(4-methoxyphenyl)phenylmethyl]-2'-O-4'-C-Locked-cytidine-3'-CE Phosphoramidite; N4-Ac-2'-O-4'-C-Locked-Cr-CE-Phosphoramidite
IUPAC Name
N-[1-[(1R,3R,4R,7S)-1-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-7-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxy-2,5-dioxabicyclo[2.2.1]heptan-3-yl]-2-oxopyrimidin-4-yl]acetamide
Molecular Weight
799.86
Molecular Formula
C42H50N5O9P
SMILES
CC(C)N(C(C)C)P(OCCC#N)OC1C2C(OC1(CO2)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC)N6C=CC(=NC6=O)NC(=O)C
InChI
InChI=1S/C42H50N5O9P/c1-28(2)47(29(3)4)57(54-25-11-23-43)56-38-37-39(46-24-22-36(44-30(5)48)45-40(46)49)55-41(38,26-52-37)27-53-42(31-12-9-8-10-13-31,32-14-18-34(50-6)19-15-32)33-16-20-35(51-7)21-17-33/h8-10,12-22,24,28-29,37-39H,11,25-27H2,1-7H3,(H,44,45,48,49)/t37-,38+,39-,41-,57?/m1/s1
InChIKey
VLHUEAKCEPSXIL-WFNFTXKBSA-N
Purity
≥95%
Storage
Store at -20 °C

Chemical Structure:

Chemical structure of BRP-00389


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